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teaching:2019winter:applcompgenomics [2019/09/17 09:21] rwittler [Table] |
teaching:2019winter:applcompgenomics [2020/09/14 08:26] (current) rwittler |
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| ... can be found in [[https://github.com/cchauve/Bielefeld-block-seminar-on-Applied-Comparative-Genomics|this github repository]]. | ... can be found in [[https://github.com/cchauve/Bielefeld-block-seminar-on-Applied-Comparative-Genomics|this github repository]]. | ||
| - | ===== Schedule (draft) ===== | + | ===== Schedule ===== |
| - | ^ First block |||| | + | ^ First block (16.–27.09.2019) |||| |
| - | | Mon | 16.09. | 10-12h | Overview: The genomes of 16 Anopheles mosquitoes | | + | | Mon | 16.09. | 10-12h | Overview: The genomes of 16 Anopheles mosquitoes | |
| - | | Tue | 17.09. | 10-12h | Data quality | | + | | Tue | 17.09. | 10-12h | Data quality | |
| - | | Wed | 18.09. | 10-12h | The //gambiae// phylogeny | | + | | Wed | 18.09. | 10-12h | The //gambiae// phylogeny | |
| - | | Thu | 19.09. | 10-12h | Use synteny to complement gene family | | + | | Thu | 19.09. | 10-12h | Use synteny for gene family analysis | |
| - | | Fri | 20.09. | 10-12h | Open reading | | + | | Fri | 20.09. | 10-12h | Open reading | |
| - | | |||| | + | | |||| |
| - | | Mon | 23.09. | 10-12h | Open reading | | + | | Mon | 23.09. | 10-12h | Open reading | |
| - | | Tue | 24.09. | 10-12h | Andreas: OrthoDB (BUSCO) | | + | | Tue | 24.09. | 10-12h | Gene-tree species-tree reconciliation | |
| - | | Wed | 25.09. | 10-12h | Jan: Improving Scaffolding | | + | | Wed | 25.09. | 10-12h | Fabian: Synteny blocks | |
| - | | Thu | 26.09. | 10-12 and 13-15h | Fabian: Synteny blocks | | + | | Thu | 26.09. | 10-12h | Jan: Improving Scaffolding | |
| - | | Fri | 27.09. | --- | | | + | | ||| Andreas: OrthoDB (BUSCO) | |
| + | | . || 13-15h | Feedback | | ||
| + | | Fri | 27.09. | --- | | | ||
| - | ^ Second block ^^^^ | + | ^ Second block (10.–14.02.2020) |||| |
| - | |Mon| 10.02.| 10-12h | | | + | | Mon | 10.02. | 10-12h | The genome rearrangement landscape | |
| - | |Tue| 11.02.| 10-12h | | | + | | Tue | 11.02. | 10-12h | Handling duplications / Small parsimony problem (SPP) | |
| - | |Wed| 12.02.| 10-12h | | | + | | Wed | 12.02. | 10-12h | Ancestral gene orders in a model-free framework | |
| - | |Thu| 13.02.| 10-12 and 13-15h | | | + | | Thu | 13.02. | 10-12h | Joint scaffolding and ancestral gene order reconstruction | |
| - | |Fri| 14.02.| --- | | | + | | Fri | 14.02. | 10-12h | Student talks | |
teaching/2019winter/applcompgenomics.1568712062.txt.gz · Last modified: 2019/09/17 09:21 by rwittler